BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB030F07LP1|AL429254
(907 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1503 1744 0.0
>3x_Contig1503
Length = 10719
Score = 1744 bits (876), Expect = 0.0
Identities = 895/904 (99%)
Strand = Plus / Minus
Query: 4 ccctaattgatgaagtattcttcataaagaaggagaagtttcgtaatggtttaaccagtt 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4740 ccctaattgatgaagtattcttcataaagaaggagaagtttcgtaatggtttaaccagtt 4681
Query: 64 ttcatatgaatatttttagatttctaaaacagccttcttgaactgatccacttcatcata 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4680 ttcatatgaatatttttagatttctaaaacagccttcttgaactgatccacttcatcata 4621
Query: 124 acagttcaacggtttttctttgttcttcaatagacattccgttaaagtcttcttcgtagc 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4620 acagttcaacggtttttctttgttcttcaatagacattccgttaaagtcttcttcgtagc 4561
Query: 184 agttactttatctgtagatttggccttatgagcctcttgtaatttcgacaaacggacctt 243
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4560 agtaactttatctgtagatttggccttatgagcctcttgtaatttcgacaaacggacctt 4501
Query: 244 caattggtctaccttttcatttactagctttgtggaaagtgcatcacctgcggacttgga 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4500 caattggtctaccttttcatttactagctttgtggaaagtgcatcacctgcggacttgga 4441
Query: 304 atcatcgggcaggatagaagactgckattttgtttcgaattcttttaaggcctccgattc 363
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 4440 atcatcgggcaggatagaagactgcaattttgtttcgaattcttttaaggcctccgattc 4381
Query: 364 caaatcagacaatttcgcagagaccttttcctgtkagtttctttctgccttttgagacct 423
|||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||
Sbjct: 4380 caaatcagacaatttcgcagagaccttttcctgtaagtatctttctgccttttgagacct 4321
Query: 424 aatgaagtccgattcagttgaattatcgatctgagcgatcaatttgctttcgaaattaac 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4320 aatgaagtccgattcagttgaattatcgatctgagcgatcaatttgctttcgaaattaac 4261
Query: 484 cggcgtttccggaacgtatactttagtttcggctggttttgaaggttgggcacccatggt 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4260 cggcgtttccggaacgtatactttagtttcggctggttttgaaggttgggcacccatggt 4201
Query: 544 ttaatgaactattgtattggaaaaaaggtgtgtgccacggcgttaacctggagttctttc 603
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 4200 ttaatgaactattgtattggaaaaaaggtgtgtgcaacggcgttaacctggagttctttc 4141
Query: 604 gcagaaggacggatctgtcgcaataagaatggggtaattgaatacgcttcgaggacgact 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4140 gcagaaggacggatctgtcgcaataagaatggggtaattgaatacgcttcgaggacgact 4081
Query: 664 ctaaactctacaattctggcaataacgtacaactttctttaacatttcattggtttaaat 723
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4080 ctaaactctacaattctggcaataacgtacaactttctttaacatttcattggtttaaat 4021
Query: 724 ttttcagtattttcctcaaaagttgaataagagatgatatacaaatacatgtwcatatat 783
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 4020 ttttcagtattttcctcaaaagttgaataagagatgatatacaaatacatgtacatatat 3961
Query: 784 gtwgagagagaagacgaagatgaagatgaagawatcaaacctgactatggtgtcaagtgc 843
|| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 3960 gtagagagagaagacgaagatgaagatgaagatatcaaacctgactatggtgtcaagtgc 3901
Query: 844 tcttcacttcatagaattctgcctcatgccawatgaggccatttgcgttggatccacata 903
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 3900 tcttcacttcatagaattctgcctcatgccatatgaggccatttgcgttggatccacata 3841
Query: 904 ctaa 907
||||
Sbjct: 3840 ctaa 3837
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7541
Number of Sequences: 1807
Number of extensions: 7541
Number of successful extensions: 122
Number of sequences better than 1.0e-20: 1
length of query: 907
length of database: 10,358,551
effective HSP length: 16
effective length of query: 891
effective length of database: 10,329,639
effective search space: 9203708349
effective search space used: 9203708349
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)